BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB015E06LP1|AL426859
(983 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1482 1925 0.0
>3x_Contig1482
Length = 10060
Score = 1925 bits (969), Expect = 0.0
Identities = 979/983 (99%), Gaps = 1/983 (0%)
Strand = Plus / Minus
Query: 1 atccaaggactgaaaaaatatctaaatttttagacgatgacgttttccaaaagttccaag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6255 atccaaggactgaaaaaatatctaaatttttagacgatgacgttttccaaaagttccaag 6196
Query: 61 aagttgtcagttacaacccgggacaagttttacgttacgatttgggaggacttcctcttt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6195 aagttgtcagttacaacccgggacaagttttacgttacgatttgggaggacttcctcttt 6136
Query: 121 actatgccaaaactccaaaggagtttgaggatttggttgctaaacctgcatataatcctt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6135 actatgccaaaactccaaaggagtttgaggatttggttgctaaacctgcatataatcctt 6076
Query: 181 cgtcgagaagggtgtttgaaatgcaactaatgcctaagatgatattagatcttgaggaag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6075 cgtcgagaagggtgtttgaaatgcaactaatgcctaagatgatattagatcttgaggaag 6016
Query: 241 aggtgtcattgactgatggtatggattggggcaccatcatggtgtataccgacatcgaga 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6015 aggtgtcattgactgatggtatggattggggcaccatcatggtgtataccgacatcgaga 5956
Query: 301 attacattccaaaattcgatgagaatcaagttggctacgtacaggaagtcgtcaaggttc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5955 attacattccaaaattcgatgagaatcaagttggctacgtacaggaagtcgtcaaggttc 5896
Query: 361 agtgggaacccattgattatgacgaagtcaanaggttgatagaatcattgtatggagtwa 420
||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |
Sbjct: 5895 agtgggaacccattgattatgacgaagtcaa-aggttgatagaatcattgtatggagtaa 5837
Query: 421 aactcatgtttttataggctgcattcataaatatatacatggaaattagttttaatctat 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5836 aactcatgtttttataggctgcattcataaatatatacatggaaattagttttaatctat 5777
Query: 481 ttacaagaaacggggaattttaacactctcgtaaactataagtttgtcaccagcctggta 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5776 ttacaagaaacggggaattttaacactctcgtaaactataagtttgtcaccagcctggta 5717
Query: 541 tccttcaaaatcgttctctaacgtaataccacattcgttgcctttattgacatcttgaac 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5716 tccttcaaaatcgttctctaacgtaataccacattcgttgcctttattgacatcttgaac 5657
Query: 601 agtttctttaccctgttttatcgtggaaattctacctttataaathacttcctcttcagg 660
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 5656 agtttctttaccctgttttatcgtggaaattctacctttataaataacttcctcttcagg 5597
Query: 661 accacggataacctttactaaggagtttctgctgactttaccattaataactttacaacc 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5596 accacggataacctttactaaggagtttctgctgactttaccattaataactttacaacc 5537
Query: 721 ggcaatcttaataaagttccttttgaccttgaattcaaaaatttcacggatttcaacagc 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5536 ggcaatcttaataaagttccttttgaccttgaattcaaaaatttcacggatttcaacagc 5477
Query: 781 ggcaatctgcttctcttcgaatattggcttcaaattgtctgtcaacgtctctgtgacgtc 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5476 ggcaatctgcttctcttcgaatattggcttcaaattgtctgtcaacgtctctgtgacgtc 5417
Query: 841 ttctattagtttataaataacattgaactgcttcacaggtattttatccttattgttaat 900
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5416 ttctattagtttataaataacattgaactgcttcacaggtattttatccttattgttaat 5357
Query: 901 gatatcattgggtacattatccaagttgaaacataaaatagtactcccggtaatctttgc 960
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5356 gatatcattgggtacattatccaagttgaaacataaaatagtactcccggtaatctttgc 5297
Query: 961 catcttcaagtcattttcggsgg 983
|||||||||||||||||||| ||
Sbjct: 5296 catcttcaagtcattttcggcgg 5274
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7646
Number of Sequences: 1807
Number of extensions: 7646
Number of successful extensions: 59
Number of sequences better than 1.0e-20: 1
length of query: 983
length of database: 10,358,551
effective HSP length: 16
effective length of query: 967
effective length of database: 10,329,639
effective search space: 9988760913
effective search space used: 9988760913
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.8 bits)